Click on the node to connect to.

Click on the node to merge into. Nodes can only be merged with other nodes representing the same metabolite. Acceptable nodes are drawn with a red overlay.

Metabolites

Label

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Icon

Color:

Shape:

Shading:

Border Width:

When labels are visible:

Note: to hide icons, set their opacity to 0.

Icon Opacity:

0.5

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Enzymes and Genes

Note that labels appear only at high zoom levels.
Show Enzyme and Gene Labels
Enzyme Label Color:
Enzyme Label Font Size:
Show EC# Labels
EC# Label Color:
EC# Label Font Size:

Pathways

Show Pathway Background Boxes
Show Pathway Labels
Note that labels appear only at high zoom levels.
Icon Color:
Label Color:
Label Font Size:

Reactions

Color:
Width:

Spontaneous or Missing Reactions

These are reactions for which no enzyme has been identified or no enzyme is required.
Color:
Width:

Non-Reaction Edges

These are user-created edges or edges that connect multiple occurrences of the same metabolite.
Color:
Width:

Other

Background Color:
Use transparent background for PNG image export
Minimum Visible Font Size:

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