Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 25.0 and MetaCyc [3] version 25.0 on 01-Jul-2021 20:53:29.
Genome
ContigTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_JADBEA0100000019,0238,747652119,750,021NCBI Assembly:GCF_014874055.1
Ortholog data available?No
Database Contents
Genes9,023
Pathways277
Enzymatic Reactions1,444
Transport Reactions62
Polypeptides8,748
Protein Complexes54
Enzymes1,075
Transporters626
Compounds1,145
Transcription Units5,821
tRNAs56
Protein Features10,184
GO Terms3
Database Version29.0
Sequence SourceGCF_014874055.1
Synonyms Actinophytocola sp. MB20
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Terrabacteria group
Actinomycetota
Actinomycetes
Pseudonocardiales
Pseudonocardiaceae
Actinophytocola
Actinophytocola algeriensis
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN15741091
NCBI BioProjectPRJNA224116
NCBI-Taxonomy1768010
Annotation ProviderNCBI RefSeq
Annotation Date2020-10-10
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version4.13
Annotation CommentBest-placed reference protein set; GeneMarkS-2+
NCBI Genome Typerepresentative



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Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC18A.