Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 25.0 and MetaCyc [3] version 25.0 on 01-Jul-2021 20:28:03.
Genome
ContigTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_JADBDZ0100000017,8647,621901538,612,339NCBI Assembly:GCF_014873935.1
Ortholog data available?No
Database Contents
Genes7,864
Pathways290
Enzymatic Reactions1,495
Transport Reactions70
Polypeptides7,623
Protein Complexes73
Enzymes1,055
Transporters689
Compounds1,177
Transcription Units5,366
tRNAs72
Protein Features8,919
Database Version29.0
Sequence SourceGCF_014873935.1
Synonyms Actinomadura sp. ACD1
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Terrabacteria group
Actinomycetota
Actinomycetes
Streptosporangiales
Thermomonosporaceae
Actinomadura
Actinomadura algeriensis
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN15740230
NCBI BioProjectPRJNA224116
NCBI-Taxonomy1679523
Annotation ProviderNCBI RefSeq
Annotation Date2020-10-10
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version4.13
Annotation CommentBest-placed reference protein set; GeneMarkS-2+
NCBI Genome Typerepresentative


Report Errors or Provide Feedback
Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC18A.