Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 28.5 and MetaCyc [3] version 28.1 on 20-Sep-2024 10:08:03.
Genome
RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NC_0171502,6382,52170472,815,241NCBI Assembly:GCF_000010945.1
pAPA42C_011183153030191,799NCBI Assembly:GCF_000010945.1
pAPA42C_020164130034182,940NCBI Assembly:GCF_000010945.1
pAPA42C_03061590249,961NCBI Assembly:GCF_000010945.1
pAPA42C_04044003,204NCBI Assembly:GCF_000010945.1
pAPA42C_05033003,035NCBI Assembly:GCF_000010945.1
pAPA42C_06022001,815NCBI Assembly:GCF_000010945.1
Total:3,0552,872701133,247,995
Ortholog data available?No
Database Contents
Genes3,055
Pathways274
Enzymatic Reactions1,489
Transport Reactions57
Polypeptides2,872
Protein Complexes66
Enzymes683
Transporters250
Compounds1,287
Transcription Units2,095
tRNAs54
GO Terms3,899
Database Version29.0
Sequence SourceGCF_000010945.1
Synonyms Acetobacter pasteurianus IFO 3283-01-42C
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Pseudomonadota
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
Acetobacter pasteurianus IFO 3283-01-42C
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMD00060949
NCBI BioProjectPRJNA224116
NCBI-Taxonomy634458
Annotation ProviderNCBI RefSeq
Annotation Date2024-03-28
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version6.7
Annotation CommentBest-placed reference protein set; GeneMarkS-2+


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Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC17.