Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 28.5 and MetaCyc [3] version 28.1 on 21-Sep-2024 00:59:59.
Genome
RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_CP0346896,1766,01376876,687,823NCBI Assembly:GCF_003994415.1
Ortholog data available?Yes
Database Contents
Genes6,176
Pathways352
Enzymatic Reactions1,964
Transport Reactions105
Polypeptides6,013
Protein Complexes208
Enzymes1,140
Transporters783
Compounds1,624
Transcription Units4,058
tRNAs59
Protein Features1
GO Terms7,782
Database Version29.0
Sequence SourceGCF_003994415.1
Synonyms Achromobacter sp. CCUG 31491
Achromobacter sp. LMG 5911
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Pseudomonadota
Betaproteobacteria
Burkholderiales
Alcaligenaceae
Achromobacter
Achromobacter spanius
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN10643443
NCBI BioProjectPRJNA224116
NCBI-Taxonomy217203
Environmentsoil
Geographic LocationAustralia
Collection Date2017-07-1
HostArabidopsis thaliana
Annotation ProviderNCBI RefSeq
Annotation Date2024-05-2
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version6.7
Annotation CommentBest-placed reference protein set; GeneMarkS-2+


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Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC17.