Database Authors
Marion Adebiyi1, Sandra C. Opara2, Promise Onyemaechi2, Eunice O. Adedeji2, Segun Fatumo3, Olubanke Ogunlana2, Thomas Beder4, Rainer Koenig4, Ezekiel Adebiyi2
1Landmark University, 2Covenant University, 3Queen Mary University of London, 4Jena University Hospital
Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [Karp16, Karp11] component of Pathway Tools software version 28.0 and MetaCyc [Caspi18] version 28.0 on 12-Jan-2025 01:40:16.
Genome
RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
623 Undisplayed Contigs/Replicons5115110062,300
Total:5115110062,300
Ortholog data available?No
Database Contents
Genes511
Pathways163
Enzymatic Reactions817
Transport Reactions7
Polypeptides511
Protein Complexes0
Enzymes412
Transporters9
Compounds809
tRNAs0
Database Version29.0
Synonyms Anopheles gambiae S
Taxonomic Lineage cellular organisms
Eukaryota
Opisthokonta
Metazoa
Eumetazoa
Bilateria
Protostomia
Ecdysozoa
Panarthropoda
Arthropoda
Mandibulata
Pancrustacea
Hexapoda
Insecta
Dicondylia
Pterygota <insects>
Neoptera
Endopterygota
Diptera
Nematocera
Culicomorpha
Culicoidea
Culicidae
Anophelinae
Anopheles <genus>
Cellia
Pyretophorus
gambiae species complex
Anopheles gambiae
Genetic Code Number 1 -- Standard
NCBI-Taxonomy7165

References

Caspi18: Caspi R, Billington R, Fulcher CA, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Midford PE, Ong Q, Ong WK, Paley S, Subhraveti P, Karp PD (2018). "The MetaCyc database of metabolic pathways and enzymes." Nucleic Acids Res 46(D1);D633-D639. PMID: 29059334

Karp11: Karp PD, Latendresse M, Caspi R (2011). "The pathway tools pathway prediction algorithm." Stand Genomic Sci 5(3);424-9. PMID: 22675592

Karp16: Karp PD, Latendresse M, Paley SM, Krummenacker M, Ong QD, Billington R, Kothari A, Weaver D, Lee T, Subhraveti P, Spaulding A, Fulcher C, Keseler IM, Caspi R (2016). "Pathway Tools version 19.0 update: software for pathway/genome informatics and systems biology." Brief Bioinform 17(5);877-90. PMID: 26454094

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Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC14.