Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 25.0 and MetaCyc [3] version 25.0 on 01-Jul-2021 20:12:14.
Genome
ContigTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_JADBEM0100000019,7659,2496045610,562,590NCBI Assembly:GCF_014873875.1
Ortholog data available?Yes
Database Contents
Genes9,765
Pathways261
Enzymatic Reactions1,382
Transport Reactions57
Polypeptides9,251
Protein Complexes84
Enzymes1,199
Transporters856
Compounds1,079
Transcription Units7,346
tRNAs51
Protein Features10,114
Database Version29.0
Sequence SourceGCF_014873875.1
Synonyms Actinopolymorpha sp. PIP 143
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Terrabacteria group
Actinomycetota
Actinomycetes
Propionibacteriales
Nocardioidaceae
Actinopolymorpha
Actinopolymorpha pittospori
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN14515410
NCBI BioProjectPRJNA224116
NCBI-Taxonomy648752
Geographic LocationAustralia
Latitude/Longitude34.93 S 138.6 E
Annotation ProviderNCBI RefSeq
Annotation Date2020-10-10
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version4.13
Annotation CommentBest-placed reference protein set; GeneMarkS-2+
NCBI Genome Typerepresentative


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Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC18A.