Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 28.5 and MetaCyc [3] version 28.1 on 20-Sep-2024 10:07:46.
Genome
RepliconTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NC_0171212,7082,57676562,906,044NCBI Assembly:GCF_000010865.1
pAPA07-010182152030191,427NCBI Assembly:GCF_000010865.1
pAPA07-020164130034182,940NCBI Assembly:GCF_000010865.1
pAPA07-03061590249,961NCBI Assembly:GCF_000010865.1
pAPA07-04044003,204NCBI Assembly:GCF_000010865.1
pAPA07-05033003,035NCBI Assembly:GCF_000010865.1
pAPA07-06022001,815NCBI Assembly:GCF_000010865.1
Total:3,1242,926761223,338,426
Ortholog data available?No
Database Contents
Genes3,124
Pathways276
Enzymatic Reactions1,504
Transport Reactions58
Polypeptides2,926
Protein Complexes66
Enzymes694
Transporters259
Compounds1,298
Transcription Units2,147
tRNAs57
GO Terms3,968
Database Version29.0
Sequence SourceGCF_000010865.1
Synonyms Acetobacter pasteurianus IFO 3283-07
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Pseudomonadota
Alphaproteobacteria
Rhodospirillales
Acetobacteraceae
Acetobacter
Acetobacter pasteurianus
Acetobacter pasteurianus IFO 3283-07
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMD00060945
NCBI BioProjectPRJNA224116
NCBI-Taxonomy634454
Annotation ProviderNCBI RefSeq
Annotation Date2024-03-29
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version6.7
Annotation CommentBest-placed reference protein set; GeneMarkS-2+


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Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC17.