Summary This Pathway/Genome Database (PGDB) was generated by the PathoLogic [1, 2] component of Pathway Tools software version 25.0 and MetaCyc [3] version 25.0 on 02-Jul-2021 03:34:32.
Genome
ContigTotal GenesProtein GenesRNA GenesPseudogenesSize (bp)NCBI Link
NZ_JACWNA01000000126125254333,590NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000000222621718235,806NCBI Assembly:GCF_015355765.1
NZ_JACWNA010000003165149115182,418NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000000411110533143,555NCBI Assembly:GCF_015355765.1
NZ_JACWNA010000005131118211139,867NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000000611010532135,129NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000000712011091133,957NCBI Assembly:GCF_015355765.1
NZ_JACWNA0100000081059915120,045NCBI Assembly:GCF_015355765.1
NZ_JACWNA010000013897865105,363NCBI Assembly:GCF_015355765.1
NZ_JACWNA010000015898045104,447NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000001774703194,464NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000001871690287,039NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000001972690387,001NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002060590180,542NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002155541073,483NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000000956560067,201NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002258561163,780NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002448461160,677NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000001248450359,991NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000001141380351,957NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000001041364146,461NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002742360643,567NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002535322139,779NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002834340039,767NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002923220131,504NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000003025250026,951NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000003115140119,306NCBI Assembly:GCF_015355765.1
NZ_JACWNA01000002617150217,439NCBI Assembly:GCF_015355765.1
14 Undisplayed Contigs/Replicons39363753,351
Total:2,2682,12560832,678,437
Ortholog data available?No
Database Contents
Genes2,267
Pathways180
Enzymatic Reactions871
Transport Reactions76
Polypeptides2,133
Protein Complexes40
Enzymes519
Transporters245
Compounds702
Transcription Units1,660
tRNAs51
Protein Features2,707
Database Version29.0
Sequence SourceGCF_015355765.1
Synonyms Actinomyces sp. WL80
Taxonomic Lineage cellular organisms
Bacteria <bacteria>
Terrabacteria group
Actinomycetota
Actinomycetes
Actinomycetales
Actinomycetaceae
Actinomyces
Actinomyces haliotis
Genetic Code Number 11 -- Bacterial, Archaeal and Plant Plastid (same as Standard, except for alternate initiation codons)
BIOSAMPLESAMN16125139
NCBI BioProjectPRJNA224116
NCBI-Taxonomy1280843
Geographic LocationSouth Korea
Collection Date2013-01-1
HostHaliotis corrugata
Annotation ProviderNCBI RefSeq
Annotation Date2020-11-12
Annotation PipelineNCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Pipeline Version4.13
Annotation CommentBest-placed reference protein set; GeneMarkS-2+
NCBI Genome Typerepresentative


Report Errors or Provide Feedback
Page generated by Pathway Tools version 29.0 (software by SRI International) on Mon Jun 30, 2025, BIOCYC18A.